BioinfoHub
Introduction and Motivation
1
Visualization
1.1
Volcano plot
1.2
Barplot
1.3
Boxplot
1.4
Scatter plot
1.5
Venn Diagram
1.6
UpSet plot
1.7
Heatmap
1.8
Bubble plot
1.9
Radar plot
2
Gene Expression Omnibus (GEO)
3
Differential Expression Analysis
4
Pathway Enrichment Anlaysis
5
Single-cell Sequencing
6
Databases
6.1
TCGA
6.2
GTEx
6.3
CCLE
6.4
Blueprint
6.5
Encode
6.6
Uniprot
6.7
Human Protein Atlas
References
Published with bookdown
BioinfoHub
Chapter 3
Differential Expression Analysis
Differential expression analysis